{"species":"Apis mellifera","complete_connectome":false,"model_type":"evidence-constrained modular model","version":"2026.09.11.1","datasets":[{"id":"hsb-2005","publication_id":"hsb-2005","version":"curation-1","url":"https://doi.org/10.1002/cne.20644","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"digital-2010","publication_id":"digital-2010","version":"curation-1","url":"https://doi.org/10.3389/fnsys.2010.00030","license":"CC-BY article; atlas assets separately unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"atlas-2023","publication_id":"atlas-2023","version":"curation-1","url":"https://doi.org/10.1002/cne.25486","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"pn-2016","publication_id":"pn-2016","version":"curation-1","url":"https://doi.org/10.3389/fnana.2016.00090","license":"CC-BY","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"odor-1999","publication_id":"odor-1999","version":"curation-1","url":"https://pubmed.ncbi.nlm.nih.gov/10583486/","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"aotu-2011","publication_id":"aotu-2011","version":"curation-1","url":"https://doi.org/10.1523/JNEUROSCI.0995-11.2011","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"sky-2016","publication_id":"sky-2016","version":"curation-1","url":"https://doi.org/10.3389/fnbeh.2016.00186","license":"CC-BY","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"cx-2020","publication_id":"cx-2020","version":"curation-1","url":"https://doi.org/10.1002/cne.24941","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"reward-1993","publication_id":"reward-1993","version":"curation-1","url":"https://doi.org/10.1038/366059a0","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"reward-1998","publication_id":"reward-1998","version":"curation-1","url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC311245/","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"dn-2017","publication_id":"dn-2017","version":"curation-1","url":"https://doi.org/10.1038/s41598-017-14954-0","license":"CC-BY","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"airflow-2016","publication_id":"airflow-2016","version":"curation-1","url":"https://doi.org/10.7554/eLife.14449","license":"CC-BY","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"vision-2018","publication_id":"vision-2018","version":"curation-1","url":"https://arxiv.org/abs/1811.07560","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"},{"id":"stone-2017","publication_id":"stone-2017","version":"curation-1","url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC6196076/","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"excluded"},{"id":"mb-1998","publication_id":"mb-1998","version":"curation-1","url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC311246/","license":"unspecified","redistribution_allowed":false,"attribution_required":true,"status":"literature metadata"}],"entities":104,"observed_individuals":13,"direct_relationships":59,"putative_relationships":2,"atlas_relationships":17,"model_relationships":0,"synaptic_relationships":0,"quantitative_transfer_functions":0,"unknown_gaps":[{"id":"whole-brain","title":"Whole-brain synaptic wiring","affected_entities":["AL","MB","CX"],"reason":"A complete synapse-resolution Apis mellifera connectome is not included or established by the consulted sources.","searched_sources":["atlas-2023","cx-2020"],"status":"UNKNOWN"},{"id":"odor-transfer","title":"Odor-specific quantitative activity","affected_entities":["AL","AL_PNs"],"reason":"Published responses exist; numerical response matrix and transfer functions are not yet curated. No individual glomeruli light up speculatively.","searched_sources":["odor-1999","pn-2016"],"status":"NOT_CURATED"},{"id":"kc-wiring","title":"Kenyon-cell synaptic partners","affected_entities":["KC","MB"],"reason":"Population estimates provide no individual identities or synapse matrix.","searched_sources":["mb-1998","pn-2016"],"status":"UNKNOWN"},{"id":"navigation","title":"Honeybee path integration","affected_entities":["CX","PB"],"reason":"Stone2017 records Megalopta sweat bees. Its IDs and model edges are excluded from the honeybee graph.","searched_sources":["stone-2017","cx-2020"],"status":"SPECIES_EXCLUDED"},{"id":"sky-response","title":"Polarized-light transfer functions","affected_entities":["AOTU","TuLAL1a","TL2"],"reason":"Anatomy alone does not supply quantitative tuning or response dynamics for these honeybee classes.","searched_sources":["sky-2016"],"status":"NOT_CURATED"},{"id":"motor","title":"Brain to wing motor pathway","affected_entities":["DNIII_2","DNIII_3","DNIII_4","VNC"],"reason":"Characterized visual responses do not establish the full upstream circuit or downstream wing motor control.","searched_sources":["dn-2017"],"status":"UNKNOWN"},{"id":"insectdb","title":"Modern atlas and CX morphology downloads","affected_entities":["CX","AOTU","LH"],"reason":"InsectBrainDB returned HTTP 403 during retrieval. Import interfaces exist; no substitute morphologies generated.","searched_sources":["atlas-2023","cx-2020"],"status":"ACCESS_BLOCKED"},{"id":"reward-dynamics","title":"Reward circuit dynamics","affected_entities":["VUMmx1"],"reason":"Sucrose-responsive physiology is known; synthetic activity is not calibrated to spike or calcium units.","searched_sources":["reward-1993"],"status":"NOT_CURATED"}],"build_commit":"uncommitted","registry_sha256":"f4173e64357b1454bdae46790cbca2d7c2235c2b0d15c89046e93bb9c2ceb38a","activity_semantics":"Qualitative stimulus exposure; no calibrated firing rates or invented neural dynamics"}